PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT03564
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 360aa    MW: 40411.6 Da    PI: 7.5595
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT03564genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.76.7e-51131411128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
               l pGfrFhPtdeelv++yLkkk+++k++++ e i + diyk++PwdLpk + +++e+ewyf+++rd ky+++ r+nr+t++g+Wkatg+d++++s+ +++ 
  EMT03564  13 LLPGFRFHPTDEELVSFYLKKKIQQKPISI-ELIMQQDIYKFDPWDLPKlASTSSETEWYFYCPRDWKYRNSARPNRVTAAGFWKATGTDRPIYSSeGTRC 112
               579***************************.89***************535556788**************************************856667 PP

       NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
               vglkk+Lvfykgra +g ktdW+mhe+rl
  EMT03564 113 VGLKKSLVFYKGRAARGIKTDWMMHEFRL 141
               ***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-5612172IPR003441NAC domain
PROSITE profilePS5100556.0213172IPR003441NAC domain
PfamPF023651.6E-2515141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MEGRDDVKSD EILLPGFRFH PTDEELVSFY LKKKIQQKPI SIELIMQQDI YKFDPWDLPK  60
LASTSSETEW YFYCPRDWKY RNSARPNRVT AAGFWKATGT DRPIYSSEGT RCVGLKKSLV  120
FYKGRAARGI KTDWMMHEFR LPSLTDPSLP KRPIDKNIPL NDSWTICRIF KKTGSMAAQR  180
ALSHAWGAPL PGATEQQHLL SAMQTGQASH FASESSTRSL QVAAVAPSNQ FISFNCGPSP  240
QVFKGPTILP FQTQAPSHKP VLRTAPPSLF FDAHFGQPEQ IAGFVTGSSA DVNASMSCRD  300
QESSTTKHGG NFRSMNNEWE APGRLDFPFG LVEDSSDDWE CNIPWESFLS PTVPAEIPQH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-481317517168NO APICAL MERISTEM PROTEIN
1ut4_B5e-481317517168NO APICAL MERISTEM PROTEIN
1ut7_A5e-481317517168NO APICAL MERISTEM PROTEIN
1ut7_B5e-481317517168NO APICAL MERISTEM PROTEIN
4dul_A5e-481317517168NAC domain-containing protein 19
4dul_B5e-481317517168NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003574551.10.0PREDICTED: protein FEZ-like
SwissprotQ9ZVH01e-91FEZ_ARATH; Protein FEZ
TrEMBLN1QSV30.0N1QSV3_AEGTA; Putative NAC domain-containing protein 9
STRINGMLOC_60079.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33663882
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.11e-92NAC family protein